InCoB 2007 Papers published in BMC Bioinformatics

  1. Ranganathan S, Gribskov M, Tan TW. Bioinformatics research in the Asia Pacific: 2007 update. BMC Bioinformatics 2007, 8(Suppl 10):S1.

  2. Kim BC, Kim WY, Park D, Chung WH, Shin KS, Bhak J. SNP@Promoter: a database of human SNPs (Single Nucleotide Polymorphisms) within the putative promoter regions. BMC Bioinformatics 2007, 8(Suppl 10):S2.

  3. Tsai RTH, Hung HC, Dai HJ, Lin YW, Hsu WL. Exploiting likely-positive and unlabeled data to improve the identification of protein-protein interaction articles. BMC Bioinformatics 2007, 8(Suppl 10):S3.

  4. Ganapathiraju M, Balakrishnan N, Reddy R, Klein-Seetharaman J. Transmembrane helix prediction using amino acid property features and latent semantic analysis. BMC Bioinformatics 2007, 8(Suppl 10):S4.

  5. Baker CJO, Kanagasabai R, Ang WT, Veeramani A, Low HS, Wenk MR. Towards ontology-driven navigation of the lipid bibliosphere. BMC Bioinformatics 2007, 8(Suppl 10):S5.

  6. Xu Q, Shi Y, Lu Q, Zhang G, Luo Q, Li Y. GORouter: an RDF model for providing semantic query and inference services for gene ontology and its associations. BMC Bioinformatics 2007, 8(Suppl 10):S6.

  7. Miotto O, Tan TW, Brusic V. Rule-based Knowledge Aggregation for Large-Scale Protein Sequence Analysis of Influenza A Viruses. BMC Bioinformatics 2007, 8(Suppl 10):S7.

  8. Chen SH, Lo CZ, Tsai MC, Hsiung CA, Lin CY. The unique probe selector: a comprehensive web service for probe design and oligonucleotide arrays. BMC Bioinformatics 2007, 8(Suppl 10):S8.

  9. Zhao H, Chan KL, Cheng LM, Yan H. Multivariate hierarchical Bayesian model for differential gene expression analysis in microarray experiments. BMC Bioinformatics 2007, 8(Suppl 10):S9.

  10. Nagaraj SH, Gasser RB, Nisbet AJ, Ranganathan S. In silico analysis of expressed sequence tags from Trichostrongylus vitrinus (Nematoda): comparison of the automated ESTExplorer workflow platform with conventional database searches. BMC Bioinformatics 2006, 2007, 8(Suppl 10):S10.

  11. Ördög R, Szabadka Z, Grolmusz V. Analyzing the simplicial decomposition of spatial protein structures. BMC Bioinformatics 2007, 8(Suppl 10):S11.

  12. Yoo PD, Sikder AR, Zhou BB, Zomaya AY. Improved general regression network for protein domain boundary prediction. BMC Bioinformatics 2007, 8(Suppl 10):S12.

  13. Chelliah V, Taylor WR. Functional site prediction selects correct protein models. BMC Bioinformatics 2007, 8(Suppl 10):S13.

  14. Dastmalchi S, Church WB, Morris MB. Modelling the structures of G protein-coupled receptors aided by three-dimensional validation. BMC Bioinformatics 2007, 8(Suppl 10):S14.

  15. Choo KH, Tong JC, Ranganathan S. Modeling Escherichia coli signal peptidase complex with bound substrate: determinants in the mature peptide influ-encing signal peptide cleavage. BMC Bioinformatics 2007, 8(Suppl 10):S15.

  16. Yanamala N, Tirupula KC, Klein-Seetharaman J. Preferential binding of allosteric modulators to active and inactive conformational states of metabotropic glutamate receptors. BMC Bioinformatics 2007, 8(Suppl 10):S16.

  17. Madhumalar A, Smith DJ, Verma C. Stability of the core domain of p53: insights from computer simulations. BMC Bioinformatics 2007, 8(Suppl 10):S17.

  18. Miotto O, Heiny AT, Tan TW, August JT, Brusic V. Identification of human-to-human transmissibility factors in PB2 proteins of influenza A by large-scale mutual information analysis. BMC Bioinformatics 2007, 8(Suppl 10):S18.

  19. Zhang GL, Khan AM, Srinivasan KN, Heiny AT, Lee KX, Kwoh CK, August JT, Brusic V. Hotspot Hunter: a computational system for large-scale screening and selection of candidate immunological hotspots in pathogen proteomes. BMC Bioinformatics 2007, 8(Suppl 10):S19.

  20. Kim WY, Kang S, Kim BC, Oh J, Cho S, Bhak J, Choi JS. SynechoNET: integrated protein-protein interaction database of a model cyanobacterium Synechocystis sp. PCC 6803. BMC Bioinformatics 2007, 8(Suppl 10):S20.

  21. Wang C, Xuan J, Chen L, Zhao P, Wang Y, Clarke R, Hoffman E. Motif-directed network component analysis for regulatory network inference. BMC Bioinformatics 2007, 8(Suppl 10):S21.

  22. Kong L, Ranganathan S. Tandem duplication, circular permutation, molecular adaptation: how Solanaceae resist pests via inhibitors. BMC Bioinformatics 2007, 8(Suppl 10):S22.

  23. Singh DT, Trehan R, Schmidt B, Bretschneider T. Comparative phyloinformatics of virus genes at micro and macro levels in a distributed computing environment. BMC Bioinformatics 2007, 8(Suppl 10):S23.



For questions about the publication, please contact Shoba (shoba.ranganathan1 --at-- gmail.com) or Tin Wee (tinwee --at-- bic.nus.edu.sg) immediately.

First Created: 31 Dec 2007
Last updated: 1 January 2008 TWTan