08.00 – 16.30

Registration (Foyer)

Venue

Ballroom B

09.00 – 09.45

Keynote 3: Yongyuth Yuthavong
Bioinformatics within and beyond biology
Chair:Suthat Fucharoen

09.45 – 10.15

Plenary lecture 1:Ram Samudrala
Computational analysis of novel drug opportunities (CANDO)
Chair:Wasun Chantratita

10.15 – 10.45

Coffee break

10.45 – 11.15

Plenary lecture 2:Yutaka Yasui
Epistasis exploration as a key element in GWAS data analysis
Chair:Wasun Chantratita

11.15 – 11.45

Plenary lecture 3: Richard Wintle
Old disorders, new approaches: genomic variability in autism spectrum disorder
Chair:Jonathan Chan

11.45 – 12.15

12.15 – 13.10

Lunch

Venue

Ballroom B

Krungthep 2

Krungthep 4

Krungthep 1

Concurrent Session

5. Virtual screening & docking
Chairperson: D Sundar

6. miRNA & sRNA
Chairperson: D Ussery

7. Pathways & networks
Chairperson: L Wong

8. PAN Asian population genomics initiative (PAPGI) session 1
Chairperson: M Phipps

13.10 – 13.30

1) Discovery of a new class of inhibitors for the protein arginine deiminase type 4 (PAD4) by structure-based virtual screening

CY Teo, S Shave, ALT Chor, AB Salleh, MB Abdul Rahman, M Walkinshaw and B Tejo

13.10
–
13.30

1) Computational discovery and RT-PCR validation of novel Burkholderia Conserved and Burkholderia pseudomallei unique sRNAs

JS Khoo, SF Chai, R Mohamed, S Nathan and M Firdaus-Raih

13.10
–
13.30

1) Integration of interactive, multi-scale network navigation approach with Cytoscape for functional genomics in the big data era

T Praneenararat, T Takagi and W Iwasaki

13.10
–
13.30

1) PAPGI – an introduction and the roadmap for follow-up from the Pan-Asia SNP project

PS Lai

Venue

Ballroom B

Krungthep 2

Krungthep 4

Krungthep 1

Concurrent Session

5. Virtual screening & docking
Chairperson: D Sundar

6. miRNA & sRNA
Chairperson: D Ussery

7. Pathways & networks
Chairperson: L Wong

8. PAN Asian population genomics initiative (PAPGI) session 1
Chairperson: M Phipps

13.30 – 13.50

2) Multiple virtual screening approaches for finding new Hepatitis c virus RNA-dependent RNA polymerase inhibitors: Structure-based screens and molecular dynamics for the pursue of new polypharmacological inhibitors

M Elhefnawi, M Gamasy and M Faris

13.30
–
13.50

2) Preferential regulation of stably expressed genes in the human genome suggests a widespread expression buffering role of microRNAs

Z Yang, D Dong, Z Zhang, J Crabbe, L Wang and Y Zhong

13.30
–
13.50

2) Discovering pathway cross-talks based on functional relations between pathways

CL Hsu and UC Yang

13.30
–
14.00

2) Bioinformatics pipelines for scaling up analysis of population genomes

T Ravasi

13.50 – 14.10

3) Large-scale reverse docking profiles and their applications

M Lee and D Kim

13.50
–
14.10

3) A computational tool for the design of live attenuated virus vaccine based on microRNA-mediated gene silencing

D Wichadakul
W Mhuanthong,
A Jongkaewwattana and
S Ingsriswang

13.50
–
14.10

3) Comparison and evaluation of pathway-level aggregation methods of gene expression data

S Hwang

14.00
–
14.20

3) Biocomputing algorithms for phenotype/ genotype correlations

MR Al-Mulla

14.10 – 14.30

4) Sanjeevini: A freely accessible web-server for target directed lead molecule discovery

B Jayaram, T Singh,
G Mukherjee, A Mathur,
S Shekhar and V Shekhar

14.10
–
14.30

4) C-mii: A tool for plant miRNA and target identification

S Numnark,
W Mhuanthong,
S Ingsriswang and
D Wichadakul

14.10
–
14.30

4) Improved statistical model checking methods for pathway analysis

CH Koh, SPalaniappan,
PS Thiagarajan and L Wong

14.20
–
14.40

4) Deep sequencing on Chinese, Malays and Indians from Singapore baseline cosmopolitan populations

R Ong

14.30 – 14.50

5) An efficient algorithm for de novo predictions of biochemical pathways between chemical compounds

M Nakamura, T Hachiya, Y Saito, K Sato and Y Sakakibara

14.30
–
14.50

5) MicroRNA-centric measurement improves functional enrichment analysis of co-expressed and differentially expressed microRNA clusters

SY Lee, KA Sohn and JH Kim

14.30
–
14.50

5) Temporal dynamics of protein complexes in PPI networks: A case study using yeast cell cycle dynamics

HW Leong and S Srihari

14.40
–
15.00

5) Systematic analysis and functional annotation of variations in the genome of an Indian individual

V Scaria

Venue

Ballroom B

Krungthep 2

Krungthep 4

Krungthep 1

Concurrent Session

5. Virtual screening & docking
Chairperson: D Sundar

6. miRNA & sRNA
Chairperson: D Ussery

7. Pathways & networks
Chairperson: L Wong

8. PAN Asian population genomics initiative (PAPGI) session 1
Chairperson: M Phipps

14.50 – 15.10

6) ChemEx: Information extraction system for chemical data curation

A Tharatipyakul, S Numnark,
D Wichadakul and S Ingsriswang

14.50
–
15.10

6) Comprehensive analysis of microRNAs in breast cancer

HT Chang, SC Li, MR Ho, HW Pan, LP Ger, LY Hu, SY Yu, WH Li and KW Tsai

14.50
–
15.10

6) CMPF: Class-switching minimized pathfinding in metabolic networks

K Lim and L Wong

15.00
–
15.20

6) The early train of man in South East Asia

M Phipps 

15.10 – 15.30

7) Mapping small molecule binding data to structural domains

FA Krüger, R Rostom and JP Overington

15.10
–
15.20

A) Intra-relation reconstruction from inter-relation: miRNA to gene expression

DK Kim, H Shin, JG Joung, SY Lee and JH Kim

15.10
–
15.20

A) Dynamic metabolic footprinting in yeast Saccharomyces cerevisiae

P Chumnanpuen,
MA Edberg Hansen,
J Smedsgaard and J Nielsen

15.20
–
15.40

Coffee Break

15.40
–
16.00

7) Population variations in Thai genomes

S Tongsima

16.00
–
16.20

8) Admixture history and local adaptation of human populations

S Xu

15.20

Coffee break

16.00 – 17.00

Poster Session 2 (Foyer): Even-numbered posters

17.00 – 18.00

Optional (Rungsit 1)
Competition Session: Gustavo Stolovitzky
IMPROVER diagnostic signature challenge and results +DREAM challenges

18.00 – 20.30

Gala Dinner (Ballroom A)